Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834480.1_cds_XP_016505635.1_18953
CDS Infomation

[gene=LOC107823498] [db_xref=GeneID:107823498] [protein=4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic] [protein_id=XP_016505635.1] [location=complement(join(86568..87495,88612..88695,89060..89127))] [gbkey=CDS]
Sequence

ATGTCATCATCAATTATAGGTCGCTGCCATTTCGTAGCAGATAGCATTGAAGCTGCCGGA
ACGAAGAGGAGGACTACAAGATGGAGGTCCCCGAGAGCAGCAGTAATTCCAAGTTTTCAT
CTCCCAATGCGCAGTAATGAAGTTAAAAATAGGACGTTCGCCGATGACATAAAAGCACTT
CGATTGATCACTGCAATCAAAACCCCATATCTACCGGATGGCAGATTCGATCTTGAGGCT
TATGACACGTTAGTAAATTTGCAAATCGAAAATGGCGCTGAGGGTGTGATAGTTGGTGGC
ACTACAGGTGAAGGTCAATTGATGAGCTGGGATGAACACATCATGCTCATTGGTCACACA
GTCAATTGTTTTGGAGGGTCCATCAAAGTCATCGGGAACACTGGAAGCAACTCCACAAGG
GAAGCAATCCATGCAACTGAACAGGGATTTGCTGTAGGTATGCATGCAGCTCTTCACATT
AATCCCTACTATGGCAAGACCTCCTTAGAGGGTTTGATTTCTCACTTTGAAAGCGTGCTC
CCTACGGGCCCTACTATCATTTATAATGTGCCATCACGAACTGGTCAAGACATCCCTCCA
CGTGTAATTCAGACAATGGCAAAGAGCCCTAACCTTGCTGGTGTCAAAGAGTGTGTTGGA
AATGATAGGGTGGAGCAGTATACAAGTGATGGGGTTGTCGTTTGGAGTGGCAATGATGAT
GAATGCCATGTTTCAAGGTGGGATTATGGTGCTACAGGAGTTATTTCTGTTACCAGCAAC
TTGGTTCCCGGTCTGATGAGAGAACTGATGTTTGGAGGAAAGAACCCTGCTTTGAACTCA
AAGCTGATGCCTTTGATGGAATGGCTGTTTCATGAACCAAACCCCATTGCTCTAAATACA
GCTTTAGCTCAACTTGGGGTTGTGAGGCCAGTCTTTCGCCTTCCATACGTTCCACTTACA
AAGGCAAAGAGAGAGGAGTTTGTGAAAATTGTTAAGGAAATTGGACGAGAGAACTTTATA
GGGGAGAGAGATGTCCAAATTTTGGATGACAATGATTTCATTTTGGTGGGTCGGTATTAG

Peptide Sequence

PEP ID

XP_016505635.1
PEP Infomation

PREDICTED: 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic [Nicotiana tabacum]
Sequence

MSSSIIGRCHFVADSIEAAGTKRRTTRWRSPRAAVIPSFHLPMRSNEVKNRTFADDIKAL
RLITAIKTPYLPDGRFDLEAYDTLVNLQIENGAEGVIVGGTTGEGQLMSWDEHIMLIGHT
VNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFESVL
PTGPTIIYNVPSRTGQDIPPRVIQTMAKSPNLAGVKECVGNDRVEQYTSDGVVVWSGNDD
ECHVSRWDYGATGVISVTSNLVPGLMRELMFGGKNPALNSKLMPLMEWLFHEPNPIALNT
ALAQLGVVRPVFRLPYVPLTKAKREEFVKIVKEIGRENFIGERDVQILDDNDFILVGRY

Transcript Sequence

Gene sequence data has not been registered.